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… enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress … in sustainable agriculture and clean energy. These evolutionary strategies that helped plants thrive under … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which …

… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is … DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University …

Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing …

Biology is currently experiencing a revolution brought on by rapid developments in genomics and … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant …

JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … molecular profiles are generated for metabolites extracted from a variety of experimental samples, including organisms … more about our submission guidelines, what you can expect from your results as well as our library standards. … …

… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …

… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes … 2019 Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic …

… selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a … and researchers, facilitating the transition from genomic sequences to biological inference and understanding of …