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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Natural Prodcast Episode 14: Nigel Mouncey
… screening platform where we’d look at 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of … development lab and research lab all the way from Ambr250 fermenters to 2 liter Dasket fermenters to 30 liter … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Picking Up Threads of Cotton Genomics
Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is … can easily distinguish the cotton species by traits such as flower color, plant height, or fiber yield. To the team’s …
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JGIota: Looking Back at Sequencing for Soybeans
… crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …
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JGI Portals
… and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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DNA Synthesis Program
… has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a …
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Honey Bee Gut Microbiota Divvy Up Dinner
… the remixing of genes in the next generation of flowering vegetation. In return for their services, bees eat … is a division of labor by these bacterial groups. But why the strain variability? The authors think the reason may …
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JGIota: The Algae Nicknamed ‘Chlamy’
UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …
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