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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are … Until recently, the Mcr gene cluster was found only in the archaeal lineage Euryarchaeota; recent studies now suggest … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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Offerings & Capabilities
… through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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Natural Prodcast Episode 3: The Primer, Part 3
… able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … biology perspective, like if you have a cluster of genes, why can’t you just engineer you know, a promoter or an …
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Synthetic Biology Informatics Group
… tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Natural Prodcast Episode 6: Marc Chevrette
… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … favorite examples of a secondary metabolite producer, and why they produce those metabolites? MARC: Well, I’m really …
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Mission
… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial …
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Taking Stock of the Known and Unknown Microbial Space
… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've … group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Scientific Advisory Committee
… and Environmental Research (BER) program, set the final sequence allocation for this program. …
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CSP New Investigator Call
… the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …
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Natural Prodcast Episode 15: Katherine Duncan
Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … bit about your perspective on that kind of technique and why it’s valuable to you? Kate Duncan: I think both genome …
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