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Frequently Asked Questions: Project Management
… can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … sequencing. … No. However, the JGI does maintain a list of protocols, found in our HERE (TK) , used successfully by … Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data …
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Natural Prodcast Episode 6: Marc Chevrette
… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … symbiont, a microbe, that produces antibiotic chemistry to protect the crop that the ants grow. So it’s a cool … this and deal with it is through these antibiotic- or antifungal-producing bacteria that live on the exoskeleton of …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Hess M., Sczyrba A., Egan R., Kim T.W., Chokhawala H., Schroth G., Luo S., Clark D.S., Chen F., Zhang T., Mackie R.I., …
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the …
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JGI Scientists Pen Genome Watch Articles
Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … Sanger Institute.” Last year for the column, Woyke wrote about the research field’s move toward characterizing … researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on …
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Natural Prodcast Episode 15: Katherine Duncan
… networking, because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been … I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome …
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Sequence‐Based Introgression Mapping Identifies Candidate White Mold Tolerance Genes in Common Bean
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Insights of biomass recalcitrance in natural Populus trichocarpa variants for biomass conversion
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … that people work with are actually alpha or gammaproteobacteria. They just have this very restricted niche. …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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