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DOE JGI Metagenome Workflow
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM … activities in this space.         Special Outreach Initiatives: … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. … Modeled on the JGI-UC …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On … took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is … has since been extended statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC Merced recently had summer internships … their internship experiences at the DOE JGI – revisit their videos at http://bit.ly/JGI15summerinternsvids . …
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Natural Prodcast Episode 8: Eric Schmidt
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … human genome, an arms race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department Head …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene …
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Multiple displacement amplification compromises quantitative analysis of metagenomes
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Natural Prodcast Episode 7: Ben Shen
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … company Wyeth that introduced enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by …
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Complete genome sequence of Marivirga tractuosa type strain (H-43T)
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