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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of … information, including a Login Walkthrough and FAQ . –– The JGI Project Management Office carries out a number of … meetings with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. …
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Natural Prodcast Episode 11: Marnix Medema
… our bedroom together with us still while she’s still four months old. So it’s not a bad location for a little baby. … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around … a fellow Berkeley professor from the De­partments of Earth and Planetary Science and Environmental Science, …
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Primer and platform effects on 16S rRNA tag sequencing
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Three Join the JGI User Executive Committee
… The JGI User Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …
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JGI-TMF Critical Minerals and Materials Call
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the JGI’s Data Policy . In cases where the JGI provides … User Portal . All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Data Policy & Support
… Data Management at the JGI … JGI Scientist Code of Conduct …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want … for data once samples are in hand at JGI? A: It takes a few months to go from start to finish, i.e., QC to separation to …
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Uncovering Earth’s virome
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted … proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and … which are both eligible for BERSS). Available Resources All JGI products are available through BERSS. Learn more about …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on developing …
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