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First Monoploid Reference Sequence of Sugarcane
… Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … sets of chromosomes to produce a monoploid reference sequence. For the highly polyploid sugarcane, an …
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Analysis of the genetic diversity of the soybean rust pathogen Phakopsora pachyrhizi reveals two major evolutionary lineages
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … is an antifungal that will actually protect the fungal farms from other fungus that want to take advantage of that … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
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The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, they essentially make it not possible for …
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … me into that because we had these new genomes that JGI had sequenced that were of these bacteria that eat methane, so …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … genome project. And that was a JGI CSP project. They sequenced that genome for us at a time when they would do …
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Natural Prodcast Episode 3: The Primer, Part 3
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the proteins that … Prodcast, and the third and final part of our Primer conversation, where we’ve introduced concepts in natural …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as a biofuel. To … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Natural Prodcast Episode 4: Nancy Keller
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … species”… he’s now found that some fungi have different ITS sequences in their genome, which might get you a little …
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