Search

… timeline of sorghum projects at the JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the 730-megabase Sorghum bicolor (L.) … it with over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s …

… to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. A primary … of interest, prior to and in conjunction with whole genome sequencing. … Jean-Marie Volland: Assistant Professor, UC … M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. J., …

… … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … …

… the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods … So you were saying, Mark, how the DNA that was breaking the sequencing from really being functional was these secondary … you have no idea how to put it back together. So a lot of sequencing depends on Illumina technology, which is usually …

… approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all …

… of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and … created in 1997 to unite the expertise and resources in DNA sequencing, informatics, and technology development … accomplishment, the JGI went on to advance basic science by sequencing scores of microbial species as well as several …

… and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … We have a lot more data. Obviously, there’s been a lot of sequencing going on, especially at the JGI and in other … very excited to learn more and hear more about what JGI and collaborators are discovering. DAN: Alright, well, I’m glad …

Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two … at Monterey Bay, to be able to then do, at real time, sequencing on the underwater rover while it’s in the middle … Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes and genomes. We’re …

The 1KFG project has brought together over 400 proposal collaborators and co-authors with affiliations at over 180 … in 29 U.S. states and 35 countries. Of the 85 proposal collaborators, 58 had never shared a proposal with each … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are …

… the Hawaiian bobtail squid. And so more recently one of my collaborators Spencer Nyholm has been working on the … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more … in this project, the interaction with JGI was really around sequencing for, I think, for the fungus garden and some of …