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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … from Earth’s Microbiomes) catalog, this work results from a collaboration involving more than 200 scientists, … out to more than 200 researchers around the world in accordance with the JGI data use policy. “I felt it is important …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … you’re going to get here is the very first episode we recorded. You’ll probably notice that the audio quality isn’t as … two prongs and one of those prongs is through a tight-knit collaboration with JGI to do genome sequencing, so to look …
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JGI@25
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.  Commissioned for the JGI’s 25th …
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Gut Fungi: Unexpected Source of Novel Chemicals
… and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … translated into expected proteins. That work was done in collaboration with the Environmental Molecular Sciences … previously known to be made only by aerobic fungi. In order to identify more of the fungal natural products, …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, a key … their ability to redirect the carbon in the cells toward particular pathways. In this case, towards BDO and away …
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Boosting Small Molecule Production in Super “Soup”
… from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the … so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, a key … their ability to redirect the carbon in the cells toward particular pathways. In this case, towards BDO and away …
Learn more
Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … An assay used for profiling transcription factor binding sites across entire genomes. This … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …
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Partners
… science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, … their capabilities through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant … these missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called … the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun sequencing are tricky because … in microbiome studies, these scientists (now at Stanford University) collaborated with the JGI. Working together, …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … dish. I didn’t know what a thermocycler looked like. I was imagining some massive contraption for amplifying genes. I … You know, given that natural products are so broad and interdisciplinary, we can always work in lots of different …
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User Advisory Committees
… Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of …
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