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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … All JGI products are available through BERSS. Learn more about our  offerings, capabilities and products . A … (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner institutions. …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences … environmental viruses, and bacteria to contribute to a more sustainable world. Learn about JGI-supported projects, …
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Mitochondrial ATP generation is more proteome efficient than glycolysis
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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User Executive Committee Charter
Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI … technical capabilities offered, including areas where more or less capacity is needed, new capabilities desired, … to the UEC. Terms are 3 years and members can serve no more than two consecutive terms. A Chair and Vice-Chair will be …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same … is critical to ensuring genes vital for growth and survival across various environments are expressed when their …
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AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens
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JGI Portals
Our data platforms are a key resource for the broader scientific … metagenomes, and metatranscriptomes. It features over 15 million viral genomes and fragments, enriched with … genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities … these datasets opens up the possibility of new insights across ecosystems and research teams. Even better, creating … Wood-Charlson, User Engagement Lead for the DOE Systems Biology Knowledgebase (KBase), as well as researchers from …
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Data Ecosystem
To expand access to integrated data, improve tools and … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity At first … to be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … bacterium itself was discovered by Olivier Gros, a marine biology professor at the Université des Antilles in …
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