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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … The Metabolomics Program is focused on understanding the critical … This program integrates cutting-edge metabolomics with genomic data to gain insights into how small molecules …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … Columbia, Canada. This is the last of the podcasts we recorded in my hotel room at SIMB, or the Society for … of researchers in the field. And they were able to define standards for the minimum information that should be …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a … resource for making high-value bioproducts. As a step toward the long-term goal, researchers are now able to … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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A roadmap for equitable reuse of public microbiome data
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence … Find more details on the instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, … has the opportunity to, you know, use that research towards secondary metabolism aims. And we need new people – …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn more … BS, Biochemistry and Cell Biology, University of California, San Diego ( …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … of course, the word Primer is a molecular biology term. We recorded the Primer as a much longer conversation, which I …
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FICUS-NERSC/KBASE
… Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … The researcher then submits a proposal for consideration in the next review cycle. All … more customized analysis, the JGI also participates in publication of results. …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC …
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