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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … be the problem. Whereas the bacteria, of course, are much smaller. But I think a lot of groups are sequencing fungi. … become so cheap to do Illumina sequencing and we can get – thousands of fungal genomes are floating out there – some …

… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, sheds …

… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low … cell sorting to sort cells into several small pools, followed by whole genome amplification and …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … across a variety of ecosystems. In particular, it predicted many more likely hosts for viruses in human …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … grant 1019985, and the University of California, Davis Small Grant in Aid of Research. … The phenotype and genotype … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most … called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) directly …

… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … al. 2019 Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …

The JGI Project Management Office carries out a number of activities to facilitate … collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …