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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … are done using web-based forms.   To view the proposal templates, go to the proposal submission page , login using your …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches … and evolutionary drivers of virus-host dynamics in soil microbial communities. …
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A bacterial metapopulation adapts locally to phage predation despite global dispersal
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … attraction to natural products was dual, the beauty of the structures and also the challenge and thinking about making … things? I think they’re the same thing. So I would rephrase that sentence and say, we’re developing this enzyme, …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … An assay used for profiling transcription factor binding sites across entire … allowing high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological mechanisms that enable fungi and algae …
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Natural Prodcast Episode 3: The Primer, Part 3
… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull … Yeah, I guess you’d use something like a gas chromatographer. Yeah. DAN: Yeah. So that involves figuring out the structure of that pure molecule. And that can that can take …
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Virus Discoveries that Keep Getting Bigger
… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … giants among viruses. Now categorized in their own phylum,  Nucleocytoviricota , these giant viruses boast … viruses has enabled findings on host range, morphological structures, and infection strategies. More recently, …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science … begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … establishment and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline … amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling strategies …
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Products
… in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … amino acids, nucleosides, etc) metabolites using normal phase chromatography coupled to tandem mass spectrometry …
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