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Natural Prodcast Episode 24: Jackie Winter and SMC
And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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Mission
The significant economies of scale achieved in doing so enabled the JGI to be the first to publish the sequence … scientific discovery. Projects focused on organisms for comparative purposes, on model systems for microbe-microbe … plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and sustainable …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good … Prodcast episodes  here . Show Notes “Enzyme Library-enabled Chemoenzymatic Tropolone Synthesis”, (preprint)  …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … and other natural product libraries, so not relying on single crystal X-ray diffraction, but looking actually at …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Accelerating Metagenomics Discoveries with Deep Learning
DNA sequencing data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Sequencing of Genomes from Environmental Single Cells
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four … In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced … metatranscriptomes), as well as the genomes of single cells of the uncultivated SAR324. The constellation …
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Natural Prodcast Episode 3: The Primer, Part 3
… be successful. Right? Because we don’t – drugs are usually single molecules, they are not extracts. And so yeah, in … in ourselves and every living thing that we know of with cells, and so… So you can think of DNA as maybe being … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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