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Structure and dynamics of the microbial communities underlying the carboxylate platform for biofuel production
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Depth distributions of nitrite reductase (nirK) gene variants reveal spatial dynamics of thaumarchaeal ecotype populations in coastal Monterey Bay
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … So it’s super fun to hear about what folks are up to in a slightly different niche in chemical enzymology. So, we … attraction to natural products was dual, the beauty of the structures and also the challenge and thinking about making …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls within that … families known up until now, and identified many novel structure predictions,” said lead author on the paper …
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Complementary Microorganisms in Highly Corrosive Biofilms from an Offshore Oil Production Facility
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Substrate promiscuity of xenobiotic-transforming hydrolases from stream biofilms impacted by treated wastewater
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Benjamin Cole
… interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how … single-cell characterization technologies (scRNA-seq, Spatial Transcriptomics). …
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Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil
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Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … — the DNA found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231 within the framework of the …
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