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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …

… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The … on developing methods for converting digital information from sequence databases into biotechnological or …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … ATAC-seq, and spatial transcriptomics to profile the plant/environmental interface. We are using these methods to … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using advanced liquid chromatography …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods …