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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … have wondered, how can SAR324 exist in so many varied environments? Now, a recent study published in Microbiome …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with …
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Evidence for H2 consumption by uncultured Desulfobacterales in coastal sediments
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Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom
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Coastal bacteria and protists assimilate viral carbon and nitrogen
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Data Ecosystem
To expand access to integrated data, improve tools and … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … tools specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even …
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Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering …
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