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… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) …

… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value … This process enables our users to explore the genetic makeup of microbial communities, shedding light on … of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) …

… focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great … Phylogenetic diversity estimates show that the gap between …

… in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … that year that the Pacific Northwest had experienced the largest bloom ever observed on planet Earth. This was the …

… We focus our efforts on integrating database mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and …

… resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …

… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire … allows us to provide diverse scientific communities with large amounts of standardized high-quality data and …

… at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… When submitting sequences to the JGI DNA Synthesis program, please include … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI … Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and …

… ; click on the call link to see specific details including project types supported, sample/capacity limits, and … instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, go to the … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …

… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … Biology Lab : a user science group dedicated to user project design, assembly, and quality control Strain … up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies …