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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any … and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the Agreement. The … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … and visualization of “big data,” and artificial Intelligent/machine learning approaches in data analysis and … include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. … pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … PARKINSON: Sure. Definitely. So, I got my PhD with Paul Hergenrother at the University of Illinois at Urbana-Champaign. …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … that are from candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… bit more into fungi and learning the differences of all the genetic differences and then expanded on on that knowledge … seems to be a new structure, and the microorganisms are novel. I mean, we have Streptomyces , but they’re new … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … at JGI in this area. If this series of podcast episodes has sparked your interest, and you want to learn more, then I … lot of like synthetic chemistry effort to create a bunch of novel compounds that actually didn’t pan out. DAN: And there …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Industry Engagement Program
… including User Facilities like the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to … among members that catalyze data flows and promote novel data applications. As a large-scale data generator, … computer analysis coupled with liquid chromatography mass spectrometry. We offer accessible, AI-ready large-scale data …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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