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Natural Prodcast Episode 18: A CSP Primer
… genomes. Fungal plant, algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual … proposals that are really multifaceted, that do request a diversity of the different capabilities that we have, that … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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Gut Fungi: Unexpected Source of Novel Chemicals
… could inform how scientists can more easily convert plants into carbon-neutral biofuels . What’s more, many natural … work shows that anaerobic fungi might be a new source of novel compounds to help bolster the bioeconomy. Summary A … fungi synthesize molecules that are sources of new chemical diversity; the team identified what looked to be three …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial … things when it comes to energy cycles — turning biomass into things like ethanol or hydrogen, or solar energy into … we have amassed an extensive repository of groundbreaking insights, significantly expanding the horizons of potential …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! This is … I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… laboratories and plant biology courses across the globe for insights into reproductive, space and genome biology . The undeniable … to have demonstrated the potential of ferns as sources of novel genetic material with applications including …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Diversity and genomic insights into the uncultured Chloroflexi from the human microbiota
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Fishing for Novel Cellulose Degraders
… community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low … tool for microbial ecologists to learn more about the diversity of microbial enzymes, which could have a plethora … “hook” of fluorescence-activated cell sorting to sort cells into several small pools, followed by whole genome …
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP … Project Management Office. For questions about the appropriateness of projects or experimental design, please contact …
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