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De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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Frequently Asked Questions: Proposal Submission
… list of open calls ; click on the call link to see specific details including project types supported, sample/capacity … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in … plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment … this identification, metabolomics enables functional genome annotation, improves understanding of the role small … mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … really simple in terms of understanding it because it’s an assembly line. You just go down the string of beads and each …
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CSP Functional Genomics
JGI’s DNA synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. …
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Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
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Deconvolute individual genomes from metagenome sequences through short read clustering
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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 80 … work and coding. Receive mentorship, network and connect with Lab staff. Increase their technical skills and …
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Frequently Asked Questions: Project Management
Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Natural Prodcast Episode 22: Alison Narayan
Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and … earlier this year. And today we have our conversation with Professor Alison Narayan, from the University of … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us …
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De novo DNA synthesis using polymerase-nucleotide conjugates
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