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Fungal Friends or Foes in Plant Roots
… microbes found in plant roots may have unknown roles. Some plants and fungi have mutually beneficial (e.g., mycorrhizal) relationships, but not all plants and fungi can form such symbiotic partnerships. To … studied how fungi associate with roots in A. thaliana plants. The work also involved researchers at the French …
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JGIota: The Algae Nicknamed ‘Chlamy’
… and what it has to teach us about other organisms – like plants. [ Editor’s Note: Merchant is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences …
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Products
… annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and Algal Resequencing SNP …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … to expand their research into analyses of early-diverging land plants to further understand their evolutionary …
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Microbiome Data Science Team
Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 3: The Primer, Part 3
DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … everywhere – that there are some very specific patterns and shared DNA across all of these things. It turns out … for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, …
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Partners
Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National …
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Natural Prodcast Episode 1: The Primer, Part 1
… the special, natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. … after that I was a professor at the University of Rhode Island for a couple of years before I left that to join a … what this shows are all of the common biochemical pathways shared by almost all living organisms. So almost all of …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… were lost in other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The … lineage of bacteria to migrate from oceans and colonize land. Terrestrial  Chloroflexota have certain traits that most marine  Chloroflexota lost when they returned to an ocean …
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The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
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User Advisory Committees
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JGI@25: Using Team Science to Build Communities Around Data
… species representing all major evolutionary lineages in the land plant tree of life.   As of the start of 2022, there … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … or C-fern — came out in the September issue of Nature Plants . C-fern has a genome approximately three times the …
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