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Plant-Microbial Interactions Group
… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Into the darkness: the ecologies of novel ‘microbial dark matter’ phyla in an Antarctic lake
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … this be a project, we want it to be a really comprehensive learning experience.” Over the course of the year, she and … their faces.” Eloe-Fadrosh considers the experience the highlight of her past year’s work at the JGI. As the students …
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Crysten Blaby-Haas
Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev … Google Scholar … Education … Awards and Service … Selected Publications …
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JGI Portals
… resource for the broader scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing projects, and …
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User Support
… define the scope of work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). … work performed at the JGI is initiated via the Work Initiation Process (WIP) interface. To submit a proposal, users must … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps Institution of Oceanography. (Courtesy of B. Moore) DAN: This is the … with us? Brad:  Unfortunately, not. We lost him about 13 years ago. So, I wish he was still with us because I know …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … …
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Lessons from Two Design–Build–Test–Learn Cycles of Dodecanol Production in Escherichia coli Aided by Machine Learning
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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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