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… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … as the rhizosphere), researchers hope this massive and integrated data set will help identify how different … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …

… actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics … of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the …

… discovery was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … the the Lawrence Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area is funded by the U.S. … Cas14 proteins on IMG/M portal …

… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … of the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …

… The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … Metagenome Stability Diagram in IMG/M Data portal …

… Berkeley National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and …

… high altitude! And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more … nature does this. The more well-known secondary metabolism systems are the “Non-Ribosomal Peptide Synthetases” or NRPSs. These are enzyme systems that grab amino acids and stick them together to …