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CSP Functional Genomics
… research and to help them translate genomic information into biological function.  The emphasis is on projects … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for … the JGI User Agreement will be an authorized representative from your institution (usually a legal counsel … listed on the “info” page for that organism on the Genome Portal . …
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Natural Prodcast Episode 4: Nancy Keller
… I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a … was this?   NANCY: This was in Lesotho. Lesotho is a little landlocked country, in southern Africa. So at the time, I … ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace …
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Genomes of multicellular algal sisters to land plants illuminate signaling network evolution
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Metabolomics
… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial … of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … external advisory body, the JAC includes representatives from all specialized JGI advisory and executive committees. … The Plant Program Advisory Committee is chartered to offer …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Natural Prodcast Episode 18: A CSP Primer
… our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 15: Katherine Duncan
… question. Kate, can you tell me the story of how you got into secondary metabolites? Kate Duncan: So I always liked … though I’ve always lived by the sea in the northeast of Scotland. It was actually when I was traveling at the end of … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed … species, such as nutrient transporters, were co-opted into symbiotic functions. Recently published in  Nature …
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