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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … proteins and were also found next to cas1 genes. Further analysis led to the identification of a new family of Cas … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … The Fungal & Algal Program harnesses cutting-edge sequencing … have direct applications in bioenergy production, carbon management, and environmental sustainability. Fungi, with …
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …
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MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and … proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of … Access to the Molecular Foundry and use of JGI capabilities …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new … FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … the idea of taking all the different natural products data that there is and putting things, coalescing them, so … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …
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The JGI Leadership Team
… This group is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide …
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Leadership
… This group is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide …
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