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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” … to have an index. You have to have the computer-searching systems. So one of the enabling technologies we wanted to do … so everybody, readers of the library, can come to our databases and look for the specific information they are …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability … within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the …

… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including … and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … using the U.S. Culture Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including … and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, … Plant microbiomes hold the amazing ability to influence plant …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they … While an ever-increasing number of phage and virus genomes have been assembled and … group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics …

… the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In …

… Database provides details on river microbes in 90% of US … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … This work was partially supported by awards from US Department of Energy (DOE) Office of Science, Office of …