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The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … biosynthetic gene clusters (BGCs), advancing pathway analysis, optimization of cell- and cell free-based … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … quality scores representing potential genomes, and nearly 44,000 metagenomes. All of the data are publicly available … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 152.100 87% 2,117 2,112 … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … and Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support by …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … through global metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of …

… infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in 2006, she was … A, Chu K, Ritter SJ, Reddy TBK, Mukherjee S et al. IMG/VR v4: an expanded database of uncultured virus genomes within a … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , who heads the  …