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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … large-scale AI-ready data and professional expertise to support the global research community in studies of … information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with the high-quality data we generate, … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work … Chief Informatics Officer …
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Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle▿ §
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … This is our conversation with Professor Ben Shen, from The Scripps Research Institute (TSRI) … and our collaborations to sequence that collection, mine genomes, and develop new technology to access natural …
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … communication and cooperation. Their partnership is widespread and cosmopolitan: more than 20,000 ascomycete …
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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … on July 15, researchers have developed multiplexed assays — experimental techniques that allow simultaneous measurement … the creation of a vast resource: nearly 3,000 genome-wide binding maps for 360 transcription factors across 10 …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA … Deputy of Genomic Technologies …
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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Integrating Experimentation with Data
… has closed           Registration fees:                   General attendees: $500     Students: $200      Postdocs: … $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint meeting! “Empowering Automated …
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Sequencing Technologies & Products
… Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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