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… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … While are still working on finalizing the tree and related publication the tree is still in development and not available for download. 9.  Q: Can I upload my own sequences? A: We can add external annotated fungal genomes, …

… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley …

… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … in a minute – we work for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science … a podcast produced by the US Department of Energy Joint Genome Institute. In each episode, we’ll be discussing the …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … tells you what some of those design rules might be and constrains hypotheses that you can test about how to put things … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …

… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … And so there are different ways that we decided which sequences made it onto that list. So the majority of them …

… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … or low-nutrient. And over a six-month period, we found 20 strains that became visible. We took off the plates. We … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …