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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called arbuscules … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Chapter Seven Phylogenetics and Phylogenomics of Rust Fungi
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … With so many fungal  genomes , the team conducted a large-scale comparison, charting several changes caused by the …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution . Mol Biol …
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The Fungi That Survive In Antarctica
Black fungi are microscopic and mighty. They survive everywhere from Antarctica to …
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact …
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon …
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