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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, …
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Phage–host coevolution in natural populations
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Targeted diversity generation by intraterrestrial archaea and archaeal viruses
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … The researcher then submits a proposal for consideration in the next review cycle. All proposals undergo technical … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …
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A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the …
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