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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …
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Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … to identify variations of essential genes in metabolic networks that were missed using traditional approaches. This …
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Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis
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Lignin deconstruction by anaerobic fungi
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … to be provocative, I have noticed that many talks about biosynthesis start by saying “Organisms contain many gene …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 …
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Streamlining Regulon Identification in Bacteria
… up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy … a deeper understanding of these transcriptional regulatory networks. … This work was supported by the U.S. Department …
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Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass
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Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
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