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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, … domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … Université des Antilles, described the morphological and genomic features of this giant filamentous bacterium, along …
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In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3)
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when … an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were … enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and listen to the first two parts ( part 1 is here and part 2 is here ) so you understand what’s happened so far in the … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
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Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … Genome Institute (JGI) is a high-throughput AI-centric genomic science user facility located at Lawrence Berkeley …
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Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils▿ †
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … trade with the collaborators. So, we used those initial analyses we’d done by hand, in order to build a machine … a siderophore, we should look carefully at these as being candidates siderophores. Or for cell-cell signaling or for, …
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Phylogeny and physiology of candidate phylum ‘Atribacteria’ (OP9/JS1) inferred from cultivation-independent genomics
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