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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … understanding of how a fundamental mechanism of evolution — DGRs — allows microbes to adapt to changing … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … this year. And today we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this description, but I’d …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … up a great body of work, with interesting perspectives on evolution of natural products biosynthesis. I think it will … you’ve] published some great papers [on] recently – on evolution of biosynthetic gene clusters. And you and I have …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … but also the ability to understand the complicated evolutionary history of strawberry in such detail is … Session mentioned that the analysis for determining the evolutionary history of strawberries wasn’t completely …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … metabolism is based on primary metabolism. It’s an evolution of primary metabolism. So a lot of the genes and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my first publication and it feels so …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial … a museum of diversity. It’s probably a snapshot of all the evolution over the past 70, 80 years. And so, we are not …
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