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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … community resource for comparative analysis and annotation of all publicly available genomes from three domains of … fragments, enriched with functional annotation, taxonomic classification, and microbial host predictions.  … …
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Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration
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Emiley Eloe-Fadrosh
… uncovers gaps in amplicon-based detection of microbial diversity. Nature Microbiol. 1: 15032. Eloe-Fadrosh EA, et … Member, Duke University (2018-2020) Section Head, Microbial Evolution & Genomics, F1000Prime Reviewer for major journals … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  … …
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Community Science Program
… the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial … you to, say, go to your grandma’s backyard. To collect the diversity that exists in the 1940s? The answer is no! If …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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