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Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
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Emiley Eloe-Fadrosh
… science. Rev. Microbiol. 18:313-314. Roux S, et al. 2019. Cryptic inoviruses are pervasive in bacteria and archaea across … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their …
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Aerobic bacteria and archaea tend to have larger and more versatile genomes
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … burst. This action triggers subsurface carbon cycling, releasing fresh organic carbon which can serve as a food source … DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … particularly sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro …
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Geochemistry and Mixing Drive the Spatial Distribution of Free-Living Archaea and Bacteria in Yellowstone Lake
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha … and also due to the inability to link experimental evidence across species. Centralized databases with large-scale …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls within … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences …
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Unusual biology across a group comprising more than 15% of domain Bacteria
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A korarchaeal genome reveals insights into the evolution of the Archaea
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