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The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … to analyze metabolites in environmental organisms, communities, and samples including state-of-the-art …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put …

Back in 2011, JGI-supported researchers published a paper in the … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …

To expand access to integrated data, improve tools and infrastructure as well as … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well beyond …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of the opinion that on the geological timescale, that most bacterial natural product systems evolved, you know, a … whole spectrum from bulk soil being one of the most complex communities on earth, and the three-member community, and …

… sojae, which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … to their lab in Mulford Hall. There, they conducted DNA analyses of samples collected on recent SOD Blitz …

Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … delicately above the leaf debris are revealed to be single bacterial cells, visible to the naked eye. The unusual size …

… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and … Nature 4:1895-1906 Sberro H. et al. 2019 Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …

Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee National …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … immediately explore and reuse the data from the GROWdb for comparative analyses with their own data on the KBase platform, without …