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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of Conduct. Event organizers will …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by … here . You can find additional webinars covering how to use our data portals here.  …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will … Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS …   Learn more about our individual calls and other opportunities …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … and discovery environment designed for biologists and bioinformaticians, developed metabolic models for thousands … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A roadmap for equitable reuse of public microbiome data
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library … as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw …
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Phylogenomically Guided Identification of Industrially Relevant GH1 β‑Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in …
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Trichoderma sp. strain AM6 whole-genome guided untargeted metabolomics: Terpenoid backbone synthesis and modulation of VOCs in tea (Camellia sinensis L.)
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