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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the production of large, …
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Natural Prodcast Episode 6: Marc Chevrette
Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … for a company. Personally, that was my first taste of big data if you want, maybe it’s medium data now. But at the …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group …
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Natural Prodcast Episode 3: The Primer, Part 3
… it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, …
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Integrating Experimentation with Data
… and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle Marriott … insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking flash talks, …
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Metabolomics Program
… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental sustainability, …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …
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Natural Prodcast Episode 11: Marnix Medema
… about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM …
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Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58
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JGI Early Career Researchers Featured in mSystems Special Issue
… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … please visit  energy.gov/science/office-science . … IMG/VR data portal …
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Scientific Advisory Committee
… sequencing, new sequencing technologies, and related informatics; overview of the scientific programs at the JGI; … and Environmental Research (BER) program, set the final sequence allocation for this program. …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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