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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Biology Lab : a user science group dedicated to user project design, assembly, and quality control Strain …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … ; click on the call link to see specific details including project types supported, sample/capacity limits, and …
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The Chlamydomonas genome project: a decade on
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Genomic Standards Consortium Projects
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Natural Prodcast Episode 15: Katherine Duncan
… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … But what would you say is– what do you think is the thrust of your lab, going forward? Kate Duncan: Yeah, so I …
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Sequencing Submission Requirements for DNA Synthesis
… Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or commercial options include …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities of flavin …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … get the credit they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are … also include that as well, those identifiers which can be frustrating at times. So people submitting posters, please …
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