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Natural Prodcast Episode 7: Ben Shen
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were …
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest … the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in …
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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Comparative Genomics of the Pine Pathogens and Beetle Symbionts in the Genus Grosmannia
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A High-Quality Genome Resource for the Oak Wilt Pathogen Bretziella fagacearum
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101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens
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