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… that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by … Right. Kate Duncan: And Pseudonocardia . And we’ve got new species which we’re currently in the process of almost … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to … each facility with separate review schedules and selection processes, making it difficult to propose projects that … one facility. The FICUS initiative not only simplifies and streamlines this process, but enables scientists to conduct …

… And so we've been really interested in trying to find new hormones that can activate receptors and clusters that … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, … the page on the From Microbes to Medicines outreach program JGI Release on DAP-Seq: Enlarging Windows into Understanding …

… in how the community itself works together to elicit new metabolite production. And we are also interested in how … local environments, and so they don’t transfer a lot of DNA back and forth, especially across species. And so then … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… interactions, and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals …

… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive …

… The JGI’s Microbial Program focuses on using cutting-edge … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …

… moved there in the early ’60s from Berkeley to work on this new budding field of marine natural products. And was at the … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … a little bit more difficult. And so getting out clean DNA can also be a challenge there too. So JGI we really have …

… this an awfully long time ago, and she’s been in her new job for a long time now, but I guess you all might not … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready to send …

… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the … JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these … restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something …