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… for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to …

… and projects through implementation of advanced analysis pipelines and tools as well as development and implementation of microservices in conjunction with the IMG platform. …

… group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of … al 2022 . HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the …

… Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that … available datasets encompassing a wide array of fungal genomes, along with curated metadata to enable comprehensive …

… Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …

… weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … custom analysis, i.e. is not part of the standard analysis pipeline but can be done on request by the PI. We currently … to long-read metagenome assemblies by JGI and uploaded to IMG? A:  Depending on the project setup, we can include as …