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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … click the “Request email change” link. This will generate an email that will go to an administrator to complete … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …
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Microbial species delineation using whole genome sequences
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … in the laboratory. “We are fortunate because the progenitor species of  Brachypodium hybridum are still extant (whereas … Mya) with a maternal  B. stacei parent. The analysis also revealed that these two  B. hybridum types don’t interbreed. …
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Natural Prodcast Episode 17: Cassandra Quave
… of infectious or inflammatory disease and these same species are being used not just by one generation but by … but looking actually at powders. And we’ve had some promising preliminary data where we’ve done this. If you think … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … and rabbits… So, can you kind of like link these pieces together for me a little bit more? Maybe it would …
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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … able to produce chemistry that deals with reactive oxygen species and so potentially could go down that route.  DAN: …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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Natural Prodcast Episode 19: Bill Fenical
… ecologists that they needed to consider chemical impact on species interactions, communication, that kind of thing. But … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … around 1990– we made some discoveries that really looked promising. We found that there were new genera, these basic …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … Research Scientific Computing Center ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science …
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