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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … aligned with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … notes. Anyone, anywhere is eligible! Nationality doesn’t matter. Generally established academics or teams of them are …
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RNA-Seq Reveals that Light and Darkness Are Different Stimuli in Freshwater Heterotrophic Actinobacteria
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … feedstock for biofuels thanks to its drought and flood hardiness. Even with little water, full sunlight and hot …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … strides in generating genome sequences for members of the microbial world through bulk community sequencing … is supported under Contract No. DE-AC02-05CH11231. This study was funded by the Max Planck Society. …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … the production of the natural product. So that was my PhD study, and then towards the end of my PhD study, then …
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Community composition and seasonal changes of archaea in coarse and fine air particulate matter
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Prokaryote Program User Advisory Committee
… on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … a lab environment, shining a light into this “biological dark matter.”  It also offers CRISPR a point of entry. By using …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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