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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… plays an important role in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this molecule, … di-GMP controls microbial colonization, which can affect pathogenic and symbiotic bacterial interactions with animals …
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First Monoploid Reference Sequence of Sugarcane
… “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of … extremely challenging. The reference sequence is useful for mapping the genes involved in sugar production and for … the overlapping segments used to define a minimum tiling path of sequences in a single contiguous region. The JGI …
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CalTeach
… with concurrent field work in local classrooms and tutoring centers. Cal Teach offers a minor in Science and Math Education, as well as a unique opportunity to complete a California K-12 science or math teaching … degree. Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and …
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Metabolic and evolutionary responses of Clostridium thermocellum to genetic interventions aimed at improving ethanol production
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Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still persists to … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files …
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Institutional User Agreements
… Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must have the legal authority to commit your institution or organization to the terms and conditions in the User Agreement.  These … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , …
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New Lineages of Life Group
… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome structure …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of Conduct. Event organizers will … throughout the entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event …
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