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Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi
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Natural Prodcast Episode 5: Brad Moore
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … because I was always swimming or surfing. And you know, 25 hours a day we’re at the beach practically. It was just – … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …
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Partnerships Development Team
… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … institutions who haven't yet partnered with the JGI. The Business Development Team works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry …
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in length, while the previous version had an average of 25,000 bp pieces. That’s the difference between assembling a …
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Frequently Asked Questions: Project Management
… for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the … Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a …
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The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of …
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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