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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Phytozome: a comparative platform for green plant genomics
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … archaea by 44%, is now available and  described November 9, 2020 in  Nature Biotechnology . Known as the GEM (Genomes … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive …
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Finding the Fermenters
… including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and …
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New Lineages of Life Group
… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … conclusions .”  Nature Communications Volume 15 Article 9873. Buscaglia, M. et all (2024) “ Adaptation strategies of … Conservative taxonomy and quality assessment of giant virus genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy … producing bio-based plant nutrition products that target soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Green genes from blue greens: challenges and solutions to unlocking the potential of cyanobacteria in drug discovery
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … validate how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … 62 mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  …
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