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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … for the JGI Annual Meeting closes on March 11, 2019. Novel Yellowstone archaeon belongs to Korarchaeota Drs. Luke McKay …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive … clustered the MAGs into 18,000 candidate species groups, 70% of which were novel compared over 500,000 existing …
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Yellowstone Lake Nanoarchaeota
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
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Metagenome-assembled bacterial genomes from benthic microbial mats in ice-covered Lake Vanda, Antarctica
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Genomic sequencing of single microbial cells from environmental samples
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat
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